Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCTGCTGCTGCT
..(((((.(((((((...(((&))))))))..)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256538
GeneSymbolC20orf141
Binding site269,288
Score0.846
Seed0
Au0.397
Energy-18.9
Binding len19
Me-7.504
Phylopstem1.166222222222222
Phylopflank0.6894312
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure