Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAACTGCAGCCATGTGAT
(((((((((((((((((....&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256542
GeneSymbolLIMS2
Binding site629,649
Score0.923
Seed1
Au0.426
Energy-21.8
Binding len20
Me-3.938
Phylopstem-0.6518014136842104
Phylopflank-0.6430440730000001
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure