Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACTCTGCCTGAAGGCCCTCTTGCGCAGCTGCC
..((((((((((((...((((&.))))...)))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256542
GeneSymbolLIMS2
Binding site867,905
Score0.846
Seed1
Au0.324
Energy-23.2
Binding len28
Me-5.925
Phylopstem2.0649687578947367
Phylopflank1.8789575920000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure