Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCAATGCCGGCTGCAGC
(((((((((..((((.(((..&)))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256560
GeneSymbolDNASE1L3
Binding site542,561
Score0.879
Seed1
Au0.515
Energy-19.8
Binding len19
Me-8.238
Phylopstem1.831186377777778
Phylopflank3.1282711775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure