Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGCCCCAGCTGCC
..(((((((.((((....(((&)))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256560
GeneSymbolDNASE1L3
Binding site1270,1288
Score0.923
Seed1
Au0.5
Energy-19.8
Binding len18
Me-7.168
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure