Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGAGCCGAGAGAGGCGGTAATATTTAGAAGCTGCAC
.(((((((.(((((.(.((((&)))).).))))).....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256570
GeneSymbolRXRG
Binding site163,204
Score1.0
Seed1
Au0.5
Energy-19.2
Binding len41
Me-5.585
Phylopstem1.029045857142857
Phylopflank1.21777431125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure