Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTGGCCCTGAGAATCCATTGCAACTGAGGTTCTGCACCCCAACAGCTGCAC
.(((((((((((((((((((.&.)).)))))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256584
GeneSymbolGYPC
Binding site571,626
Score0.846
Seed1
Au0.471
Energy-23.4
Binding len38
Me-3.793
Phylopstem-0.17906228888888887
Phylopflank-0.21194966624999995
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
Position5UTR
2D Structure