Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATAATACACCATATATGGTACAATCGTAGTTGTAT
.((((((((((((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256598
GeneSymbolPPDPFL
Binding site1772,1809
Score0.846
Seed1
Au0.721
Energy-22.6
Binding len18
Me-3.793
Phylopstem-0.534035053125
Phylopflank0.09748494125000001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure