Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCACAGCCGGCTGCAC
.((((((..(((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256599
GeneSymbolTRIM46
Binding site2160,2179
Score1.0
Seed1
Au0.279
Energy-22.9
Binding len19
Me-7.163
Phylopstem-1.1831894285714284
Phylopflank2.42579489
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure