Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAATTGCGGCCGTATGCGCGGC
((((.(((((((((((((...&.))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256609
GeneSymbolGLMP
Binding site18,43
Score0.846
Seed0
Au0.338
Energy-19.8
Binding len20
Me-8.057
Phylopstem0.4181419642857143
Phylopflank-0.06971250116666673
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure