Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGAATGCAAAAGAAAGAGCTGAGCTTGCAGCCGCTGCTGTGGG
(((((((.(((((((((((.(&.).))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256617
GeneSymbolTUBGCP2
Binding site385,430
Score0.923
Seed1
Au0.426
Energy-28.2
Binding len23
Me-6.251
Phylopstem-0.9857566363636362
Phylopflank-0.6337969812500001
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure