Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGAATGCAAAAGAAAGAGCTGAGCTTGCAGCCGCTGCTGTGGG
(((((((.(((((((((((.(&.).))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256618
GeneSymbolTUBGCP2
Binding site196,241
Score0.923
Seed1
Au0.426
Energy-28.2
Binding len23
Me-6.251
Phylopstem-1.3062274545454546
Phylopflank-0.6461355562499999
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
Position5UTR
2D Structure