Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCTCCAGCTGCACTGCAGC
((((((.((((((((...(((&)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256620
GeneSymbolR3HCC1L
Binding site3198,3220
Score0.846
Seed0
Au0.382
Energy-22.1
Binding len22
Me-5.714
Phylopstem0.386387
Phylopflank0.29360915
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure