Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTGAGCAGCTGCAGCTCCGGA
(((.((((((((((((.....&.)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256629
GeneSymbolBRSK2
Binding site4056,4080
Score1.0
Seed0
Au0.5
Energy-21.7
Binding len18
Me-6.97
Phylopstem4.195270166666666
Phylopflank2.278745615
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure