Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTTTCCTGCAGCTGGGC
.(.(((((((((.....((((&))))......))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256647
GeneSymbolNR1H2
Binding site819,841
Score0.846
Seed0
Au0.368
Energy-20.7
Binding len22
Me-8.465
Phylopstem4.071392222222222
Phylopflank5.2559064750000015
Longest consecutive pairings9
Position of longest consecutive pairings3
Pairings in 3prime end4
PositionCDS
2D Structure