Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAGGCCAAGGCTGCAGG
((((((((..((((....(((&)))...))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256657
GeneSymbolCHRND
Binding site2399,2420
Score0.846
Seed1
Au0.485
Energy-20.2
Binding len21
Me-7.205
Phylopstem-0.312620475
Phylopflank0.05167853999999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure