Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGAACCTCAGCAGCTGCAGA
((((((((((((((.(..(((&))).).))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256667
GeneSymbolFAM193A
Binding site133,157
Score0.846
Seed1
Au0.397
Energy-24.5
Binding len24
Me-4.673
Phylopstem5.445053452941176
Phylopflank3.36896002375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure