Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTTTGCGGCTTGCGAC
((((((((((((.....(((.&)))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256678
GeneSymbolPRORP
Binding site132,152
Score0.846
Seed1
Au0.471
Energy-17.3
Binding len20
Me-7.052
Phylopstem0.008381315384615371
Phylopflank-0.010911436250000009
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure