Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCCTCAGTGTCTCTGGCAGACCCATCGGCAGCTCTGCCAGGTG
((((((((.....(((.(((..&.))).)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256696
GeneSymbolPRDM11
Binding site1761,1807
Score0.846
Seed1
Au0.412
Energy-18.2
Binding len21
Me-13.697
Phylopstem0.21589796249999993
Phylopflank0.40205707375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure