Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATTGTGAAGAGCGACACAACTGCCTGCTGCC
..(((((.((((((((...((&.))...))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256702
GeneSymbolUSP3
Binding site1941,1976
Score1.0
Seed0
Au0.529
Energy-21.1
Binding len22
Me-7.271
Phylopstem2.4453437499999997
Phylopflank2.0238500000000004
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure