Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAAAAGCAGCTGTG
..((((((((..((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363577
GeneSymbolRBPJ
Binding site5519,5536
Score1.0
Seed1
Au0.647
Energy-21.1
Binding len17
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure