Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCCGGAAGTTCCCCTTTGTCTGCAAA
((((((((.(((((((.((((&))))))))))).)...........).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256720
GeneSymbolCLEC19A
Binding site625,658
Score1.0
Seed1
Au0.515
Energy-20.0
Binding len33
Me-4.994
Phylopstem3.0204394
Phylopflank1.4746356412499997
Longest consecutive pairings11
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure