Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAGGAGCCGCCACTGCC
..((((..((((((.(..(((&)))...).))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256727
GeneSymbolUSP39
Binding site282,303
Score0.923
Seed0
Au0.382
Energy-18.8
Binding len21
Me-9.55
Phylopstem5.716096666666666
Phylopflank3.5450234462500005
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure