Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAATCAACCACAGACTGCAT
.((((((((.(((((...((.&))...))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256735
GeneSymbolSSBP2
Binding site2730,2751
Score0.923
Seed1
Au0.618
Energy-21.1
Binding len21
Me-5.269
Phylopstem0.2845354444444444
Phylopflank-0.018807175000000016
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure