Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAGAACAGCCTCATGCTGTCAAGCTGCAGA
(((((((((((((....((((&.))))...)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256736
GeneSymbolSSBP2
Binding site3147,3181
Score0.846
Seed1
Au0.529
Energy-20.9
Binding len24
Me-5.763
Phylopstem0.16228993333333333
Phylopflank-0.003939362500000015
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure