Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTATTGCTGTGGCTGTAC
.((((((((((((.(((..((&))..))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256748
GeneSymbolSSUH2
Binding site1137,1158
Score0.846
Seed1
Au0.441
Energy-19.1
Binding len21
Me-4.65
Phylopstem2.4193441416666666
Phylopflank1.68262256625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure