Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGATTGCACCGCTGCAC
.(((((((((((((....(((&)))..)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256750
GeneSymbolPEX5L
Binding site5049,5070
Score0.923
Seed1
Au0.368
Energy-19.4
Binding len21
Me-4.762
Phylopstem0.25220291333333333
Phylopflank-0.06455935125
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure