Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGATTGCACCGCTGCAC
.(((((((((((((....(((&)))..)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256753
GeneSymbolPEX5L
Binding site4878,4899
Score0.846
Seed1
Au0.368
Energy-19.4
Binding len21
Me-4.762
Phylopstem-0.14116154666666664
Phylopflank-0.07853402125
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure