Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCGACCGCTGCCTGG
...((((.((((((((..(((&)))...)))))))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256760
GeneSymbolHTR2C
Binding site532,553
Score0.846
Seed0
Au0.353
Energy-20.8
Binding len21
Me-8.828
Phylopstem2.8343724999999997
Phylopflank1.87386806025
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure