Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGGCCTACCTGTGCCTGGCCAAGGCCCGGGTGGAGCAGCTGCGAA
((((((((((((((((.((((&.)))).))...))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256766
GeneSymbolTMEM161A
Binding site738,789
Score0.846
Seed1
Au0.309
Energy-23.6
Binding len34
Me-3.938
Phylopstem0.31876537037037034
Phylopflank1.4349047874999994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure