Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCAC
.((.(((((((((((...((.&.))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256787
GeneSymbolPLEKHA5
Binding site3470,3510
Score1.0
Seed0
Au0.471
Energy-23.4
Binding len20
Me-7.058
Phylopstem2.544435
Phylopflank2.2024139412499997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure