Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGGGGCCAAAGGCTGCGAG
((((((((..((((.((....&)).))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256802
GeneSymbolRPS3
Binding site416,435
Score0.897
Seed1
Au0.412
Energy-18.1
Binding len19
Me-6.972
Phylopstem5.375426749999999
Phylopflank6.1717338225
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure