Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCAAAATCTAAAGACGCAGAAACAACTAATGTAGCTGCAGA
((((((((((((((((.....&.))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256819
GeneSymbolCLRN1
Binding site830,877
Score1.0
Seed1
Au0.647
Energy-21.8
Binding len21
Me-3.938
Phylopstem0.08018842842105263
Phylopflank-0.20495704
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure