Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTGAACTGCAGTGCTGTAT
.(((((((((((((...((((&))))...)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256820
GeneSymbolRIT1
Binding site681,704
Score0.923
Seed1
Au0.574
Energy-19.2
Binding len23
Me-4.762
Phylopstem0.020974199999999995
Phylopflank-0.02679012375
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure