Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGACCGGCTGTGGT
(((((((..((((((...(((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256820
GeneSymbolRIT1
Binding site41,58
Score0.846
Seed1
Au0.397
Energy-15.9
Binding len17
Me-7.541
Phylopstem0.09158385714285713
Phylopflank0.43430157750000004
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure