Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTGAACTGCAGTGCTGTAT
.(((((((((((((...((((&))))...)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256821
GeneSymbolRIT1
Binding site764,787
Score1.0
Seed1
Au0.574
Energy-19.2
Binding len23
Me-4.762
Phylopstem0.7906642133333334
Phylopflank0.04588015874999998
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure