Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATGAGCCGCTCCAATGTCCAGCCCACAGCTGCC
..(((((((.(((((......&.)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256834
GeneSymbolAURKB
Binding site117,154
Score0.923
Seed1
Au0.397
Energy-19.1
Binding len16
Me-6.433
Phylopstem-0.3172651428571428
Phylopflank1.08460272
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure