Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAAGTGCAAAATACAGACTTGTGTGCCAT
...(((((((((((((((((..&)))))))................)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256850
GeneSymbolTTN
Binding site18836,18870
Score0.923
Seed0
Au0.632
Energy-19.1
Binding len34
Me-6.515
Phylopstem4.010188531515152
Phylopflank3.929188666750001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure