Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCCCAACCTACAGCTGCAGA
(((((((((.(((((..((((&))))..)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256850
GeneSymbolTTN
Binding site11711,11734
Score0.962
Seed1
Au0.515
Energy-23.4
Binding len23
Me-5.413
Phylopstem4.055852477777778
Phylopflank4.000668878750002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure