Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGAACAGCTGTAGTTGG
...(((((((((((((.(((.&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256856
GeneSymbolBTRC
Binding site4924,4943
Score0.846
Seed0
Au0.515
Energy-20.1
Binding len19
Me-6.515
Phylopstem0.1800633076923077
Phylopflank0.6848344825
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure