Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTGTCAACCTTGCACTGCAC
.(((((.((((((((...(((&)))....)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256856
GeneSymbolBTRC
Binding site3106,3129
Score0.846
Seed0
Au0.5
Energy-19.3
Binding len23
Me-5.57
Phylopstem0.32006639
Phylopflank0.25273403875000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure