Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAAAGTCCTATGGCGAGCGGCTGCAGCTGCAGG
((((((((((((((((..(.(&.).)..)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256858
GeneSymbolRNF34
Binding site435,471
Score0.846
Seed1
Au0.441
Energy-28.3
Binding len23
Me-3.938
Phylopstem3.6384805750000004
Phylopflank4.673544142499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure