Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCTGGGCTGGAGGCATGGCCAGAGGGGTCATGGCCAGCAGCTGCC
..((((((((((((((.....&.)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363592
GeneSymbolBEST1
Binding site1525,1575
Score0.885
Seed1
Au0.382
Energy-21.6
Binding len17
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure