Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCGTCATGTCGGGC
.((((((((...(((((((...&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256864
GeneSymbolDNAJC6
Binding site82,99
Score0.923
Seed1
Au0.618
Energy-15.6
Binding len17
Me-11.207
Phylopstem0.6349772499999999
Phylopflank0.09660581249999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure