Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGAACCACCGCATTCCACCCTGCC
..((((.((((((((((((((&)))))))).....)))))).......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256865
GeneSymbolDNAJC6
Binding site3244,3275
Score0.846
Seed0
Au0.441
Energy-20.3
Binding len31
Me-6.501
Phylopstem0.24155806315789474
Phylopflank0.6370390562500001
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end8
Position3UTR
2D Structure