Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTGTGCGACGAGTTTCAGCTGGCCAAGAAAGGAGTCAAGTT
.(((((((((((((((((((((&)))))))........................)))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330674
GeneSymbolLIMCH1
Binding site4150,4197
Score0.846
Seed1
Au0.574
Energy-26.6
Binding len47
Me-3.793
Phylopstem0.2208817293478261
Phylopflank-0.04778200125000001
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure