Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGAAACATTAAGAAGCTCTCCAACCGTCTCGCCCAAATCTGCAGCAGCAT
.(((.(((((((......(((&.))).....))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256875
GeneSymbolCDCA8
Binding site946,1002
Score0.846
Seed0
Au0.471
Energy-18.3
Binding len21
Me-11.027
Phylopstem1.3468734285714283
Phylopflank1.9453839746250001
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure