Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCACAGAGATCCGTCCACAAAAGCGGAAAAAGGGGCCAGC
..(((((((((((.(((((...&))))).........................))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363595
GeneSymbolNR1H3
Binding site210,252
Score0.846
Seed1
Au0.441
Energy-21.9
Binding len42
Me-5.814
Phylopstem3.181078181818182
Phylopflank1.7801517974999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure