Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCACTCAAAATCCATTTGTGAAACCAAAACTGCAGTCTGTAC
.(((((((((((((....(((&.)))..)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256887
GeneSymbolCALHM4
Binding site1618,1666
Score1.0
Seed1
Au0.676
Energy-20.0
Binding len21
Me-4.762
Phylopstem0.22516300714285714
Phylopflank-0.03984743874999999
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure