Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGCAACCATTGCTGCC
..(((((...(((((((((((&)))))).)))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256889
GeneSymbolCALHM4
Binding site222,243
Score0.923
Seed0
Au0.485
Energy-22.5
Binding len21
Me-9.57
Phylopstem1.3853464166666667
Phylopflank1.2699636175000002
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure